User profiles for K. Upton

Kyle Upton

NHMRC Research Fellow, School of Chemisty and Molecular Biosciences - University of …
Verified email at mater.uq.edu.au
Cited by 2513

Somatic retrotransposition alters the genetic landscape of the human brain

JK Baillie, MW Barnett, KR Upton, DJ Gerhardt… - Nature, 2011 - nature.com
Retrotransposons are mobile genetic elements that use a germline ‘copy-and-paste’ mechanism
to spread throughout metazoan genomes 1 . At least 50 per cent of the human genome …

[HTML][HTML] Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma

R Shukla, KR Upton, M Muñoz-Lopez, DJ Gerhardt… - Cell, 2013 - cell.com
LINE-1 (L1) retrotransposons are mobile genetic elements comprising ∼17% of the human
genome. New L1 insertions can profoundly alter gene function and cause disease, though …

[PDF][PDF] Ubiquitous L1 mosaicism in hippocampal neurons

KR Upton, DJ Gerhardt, JS Jesuadian, SR Richardson… - Cell, 2015 - cell.com
Somatic LINE-1 (L1) retrotransposition during neurogenesis is a potential source of genotypic
variation among neurons. As a neurogenic niche, the hippocampus supports pronounced …

Extensive somatic L1 retrotransposition in colorectal tumors

…, A Casella, B Erlanger, S Wheelan, KR Upton… - Genome …, 2012 - genome.cshlp.org
… , 1% SDS, 1 Mm NaCl, 10 μg/mL Proteinase K). Following digest, DNA was purified using
phenol-… Goodier, and Prabhat K. Mandal for their great insights into the project and for their …

[PDF][PDF] Efficient mitosis in human cells lacking poleward microtubule flux

NJ Ganem, K Upton, DA Compton - Current biology, 2005 - cell.com
Chromosome segregation relies on the dynamic properties of spindle microtubules (MTs).
Poleward MT flux contributes to spindle dynamics through the disassembly of MT minus ends …

[PDF][PDF] Genomic profiling of childhood tumor patient-derived xenograft models to enable rational clinical trial design

…, K McCoy, M Haber, K Evans, H McCalmont, K Bendak… - Cell reports, 2019 - cell.com
Accelerating cures for children with cancer remains an immediate challenge as a result of
extensive oncogenic heterogeneity between and within histologies, distinct molecular …

[HTML][HTML] Reprogramming triggers endogenous L1 and Alu retrotransposition in human induced pluripotent stem cells

S Klawitter, NV Fuchs, KR Upton… - Nature …, 2016 - nature.com
… We found no de novo LTR retrotransposon insertions, despite observing profound upregulation
of HERV-K group HML-2 transcription in hiPSCs and hESCs (Supplementary Methods; …

Mapping groundwater recharge in Africa from ground observations and implications for water security

…, JPR Sorensen, M Tijani, KA Upton… - Environmental …, 2021 - iopscience.iop.org
Groundwater forms the basis of water supplies across much of Africa and its development is
rising as demand for secure water increases. Recharge rates are a key component for …

[HTML][HTML] Pleiotropic impacts of macrophage and microglial deficiency on development in rats with targeted mutation of the Csf1r locus

…, R Wallace, K Grabert, KR Upton… - The Journal of …, 2018 - journals.aai.org
We have produced Csf1r-deficient rats by homologous recombination in embryonic stem
cells. Consistent with the role of Csf1r in macrophage differentiation, there was a loss of …

[HTML][HTML] An investigation into compassion fatigue and self-compassion in acute medical care hospital nurses: A mixed methods study

KV Upton - Journal of Compassionate health care, 2018 - Springer
Background In the acute medical care hospital setting, nursing the sick and dying is both
physically and emotionally demanding, making acute medical care hospital nurses more …